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Series GSE75330 Query DataSets for GSE75330
Status Public on Jun 10, 2016
Title RNA-seq analysis of single cells of the oligodendrocyte lineage from nine distinct regions of the anterior-posterior and dorsal-ventral axis of the mouse juvenile central nervous system
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary 5069 transcriptomes of single oligodendrocyte cells from spinal cord, substantia nigra-ventral tegmental area, striatum, amygdala, hypothalamic nuclei, zona incerta, hippocampus, and somatosensory cortex of male and female mice between post-natal day 21 and 90. The study aimed at identifying diverse populations of oligodendrocytes, and revealing dynamics of oligodendrocyte maturation.
 
Overall design 5069 individual cells were sampled from CNS regions of mice of various strains as detailed in the protocols section
 
Contributor(s) Marques S, Zeisel A, Linnarsson S, Castelo-Branco G
Citation(s) 27284195
Submission date Nov 24, 2015
Last update date Mar 19, 2019
Contact name Sten Linnarsson
Organization name Karolinska Institutet
Department Medical Biochemistry and Biophysics
Lab Molecular Neurobiology
Street address Scheeles väg 1
City Stockholm
ZIP/Postal code 171 65
Country Sweden
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (5069)
GSM2160191 C1-1771017-028-D03
GSM2160192 C1-1771017-028-D09
GSM2160193 C1-1771017-028-E01
Relations
BioProject PRJNA303966
SRA SRP066613

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE75330_Marques_et_al_mol_counts2.tab.gz 13.6 Mb (ftp)(http) TAB
Raw data are available in SRA
Processed data is available on Series record

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