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Series GSE73727 Query DataSets for GSE73727
Status Public on Jan 05, 2016
Title Single-cell transcriptomics reveals unique features of human pancreatic islet cell subtypes
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We report the single-cell RNA-seq based identification of 6 known human islet cell types (alpha cells, beta cells, delta cells, pp cells, acinar cells and duct cells) based on the expression of known marker genes. We further assess cell type specific gene expression and suggest novel marker genes for several cell types.
Overall design Transcriptional dissection of human pancreatic islets of one donor using single-cell RNA-seq
Contributor(s) Li J, Klughammer J, Farlik M, Penz T, Spittler A, Barbieux C, Berishvili E, Bock C, Kubicek S
Citation(s) 26691212, 27916275
Submission date Oct 05, 2015
Last update date May 15, 2019
Contact name Christoph Bock
Organization name CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences
Street address Lazarettgasse 14
City Vienna
ZIP/Postal code 1090
Country Austria
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (72)
GSM1901455 islet_single_cell_1
GSM1901456 islet_single_cell_2
GSM1901457 islet_single_cell_3
BioProject PRJNA297774
SRA SRP064464

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE73727_RAW.tar 444.9 Mb (http)(custom) TAR (of TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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