|
| Status |
Public on Sep 08, 2015 |
| Title |
The methylome of Alu repeats in colon cancer (CGH) |
| Organism |
Homo sapiens |
| Experiment type |
Genome variation profiling by genome tiling array
|
| Summary |
Next Generation Sequencing of Unmethylated Alu (NSUMA) interrogation of more than 130,000 individual Alus for differential methylation with concomitant analysis of copy number variations applied to the study of hypomethylation in colorectal cancer.
|
| |
|
| Overall design |
normal colon tissues, matched primary tumors, and colon derived cell lines
|
| |
|
| Contributor(s) |
Jordà M, Díez-Villanueva A, Martín B, Lois S, Mallona I, Peinado MA |
| Citation(s) |
27999094 |
| |
| Submission date |
Sep 04, 2015 |
| Last update date |
Mar 21, 2017 |
| Contact name |
Miguel A. Peinado |
| E-mail(s) |
mpeinado@igtp.cat
|
| Organization name |
IGTP
|
| Street address |
Can Ruti Campus
|
| City |
Badalona |
| ZIP/Postal code |
08916 |
| Country |
Spain |
| |
|
| Platforms (1) |
| GPL9777 |
Agilent-021850 SurePrint G3 Human CGH Microarray (Feature Number version) |
|
| Samples (5)
|
|
| This SubSeries is part of SuperSeries: |
| GSE72751 |
The methylome of Alu repeats in colon cancer |
|
| Relations |
| BioProject |
PRJNA294810 |
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