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Series GSE72009 Query DataSets for GSE72009
Status Public on Aug 11, 2016
Title Identification of p63 binding regions in a p63 expressing basal-subtype breast cancer cell line, MCFDCIS.
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary p63 ChIP-SEQ in a p63 expressing basal-subtype breast cancer cell line, MCFDCIS and in a p63 deficient claudin-low subtype breast cancer cell line, MDA-MB-231
 
Overall design p63 ChIP-SEQ on MCFDCIS and MDA-MB-231 cell lines
 
Contributor(s) Pearson GW
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Aug 12, 2015
Last update date May 15, 2019
Contact name Xiaoyu Wang
E-mail(s) xiaoyu.wang@utsouthwestern.edu
Organization name Ut Southwestern Medical Center
Department Cancer Center
Lab Genomics Core
Street address ND3 200, 6001 Forest Park Rd
City Dallas
State/province Texas
ZIP/Postal code 75390
Country USA
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (6)
GSM1849666 6-20-14_DCIS_Input
GSM1849667 6-20-14_DCIS_p63
GSM1849668 6-25-14_DCIS_Input
Relations
BioProject PRJNA292709
SRA SRP062337

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE72009_RAW.tar 1.1 Mb (http)(custom) TAR (of NARROWPEAK)
SRA Run SelectorHelp
Processed data provided as supplementary file
Raw data are available in SRA

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