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| Status |
Public on Jun 18, 2015 |
| Title |
Comparison of glucocorticoid receptor (NR3C1) binding in wild type and Klf15-/- MEFs |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
The objective of this study was to dertemine GR binding patterns within wild type murine embryonic fibroblasts in comparison to embryonic fibroblasts derived from mice containing a null mutation for Klf15.
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| |
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| Overall design |
This study utilized duplicate samples and the following conditions. Wild type cells treated with ethanol (pooled single sample secondary to low starting material); wild type cells treated with dexamethasone for 1 hour (2 samples); Klf15-/- cells treated with ethanol (2 samples); Klf15 -/- cells treated with dexamethasone (2 samples). Samples treated with ethanol served as controls.
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| |
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| Contributor(s) |
Sasse SA, Jain MK, Phang TL, Gerber AN |
| Citation(s) |
26088140 |
| |
| Submission date |
Jun 17, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Tzu Lip Phang |
| E-mail(s) |
tzu.phang@ucdenver.edu
|
| Phone |
(303) 724-6057
|
| Organization name |
University of Colorado, Denver
|
| Department |
Medicine
|
| Street address |
12700 East 19th Avenue
|
| City |
Aurora |
| State/province |
CO |
| ZIP/Postal code |
80045 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
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| Samples (7)
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| Relations |
| BioProject |
PRJNA287225 |
| SRA |
SRP059593 |
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