GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE69590 Query DataSets for GSE69590
Status Public on Aug 09, 2016
Title HBV Infection and DNA Stimulation Induce a Unique Innate Immune Response in Hepatocytes
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Background and Aims: Recent identification of intracellular DNA sensing pathways and involvement in numerous diverse disease processes including viral pathogenesis and autoimmunity suggests a role for these processes in liver pathology. The presence of these pathways in the liver and their role in HBV infection is unknown. Methods: In order to characterize the role of DNA sensing pathways in the liver, we utilized in vitro models. Microarray was performed on DNA treated and HBV infected hepatoma primary human hepatocytes. Results: Here we show that HBV infection and foreign DNA results in a significant innate immune response characterized by the production of inflammatory chemokines.
The goal of this study is to characterize the changes in gene expression triggered by HBV and foreign DNA in primary human hepatocytes.
Overall design PHHs were infected with HBV (MO.I = 50) for 40 hours. PHHs were transfected with 1μg/mL of ISD/dsDNA90 for 12 or 24 hours. Three replicates were performed for each condition.
Contributor(s) Yoneda M, Hyun J, Schiff ER, Thomas E
Citation(s) 27288535
Submission date Jun 04, 2015
Last update date Mar 25, 2019
Contact name Emmanuel Thomas
Phone 305-243-2895
Organization name University Of Miami School of Medicine
Department Schiff Center for LIver Diseases
Street address 1550 NW 12th Ave, Papanicolaou Bldg., RM. PAP 514
City Miami
State/province FL
ZIP/Postal code 33136
Country USA
Platforms (1)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
Samples (15)
GSM1704249 Cont ISD/dsDNA90 1
GSM1704250 Cont ISD/dsDNA90 2
GSM1704251 Cont ISD/dsDNA90 3
BioProject PRJNA285918

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE69590_RAW.tar 74.0 Mb (http)(custom) TAR (of CEL)
Raw data provided as supplementary file
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap