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Series GSE6923 Query DataSets for GSE6923
Status Public on Mar 19, 2008
Title E. coli K-12 wild type with R1drd19 biofilm vs wild type without R1drd19 biofilm
Platform organism Escherichia coli K-12
Sample organism Escherichia coli
Experiment type Expression profiling by array
Summary E. coli K-12 wild type strains gene expression in biofilm cells with R1drd19 relative to that in biofilm cells of E. coli K-12 wild type strains without R1drd19. All the samples were cultured in LB or M9C glu on glass wool at different time.
Keywords: biofilm
 
Overall design Strains: E. coli K-12 strains with and without R1drd19 respectively;
Medium: LB was used for BW25113 strains, and M9C glu was used for MG1655 strains;
Biofilm grown on glass wool;
Time: 7h, 15h, 24h respectively;
Cell type: biofilm.
 
Contributor(s) Yang X, Wood TK
Citation(s) 18344336
Submission date Jan 30, 2007
Last update date Mar 16, 2012
Contact name Xiaole Yang
E-mail(s) xiaole.yang@chemail.tamu.edu
Organization name Texas A & M University
Street address Chemical Engineering Department
City College Station
State/province TX
ZIP/Postal code 77840
Country USA
 
Platforms (1)
GPL199 [Ecoli_ASv2] Affymetrix E. coli Antisense Genome Array
Samples (10)
GSM147162 ATCC25404 wild type LB 24hr biofilm cells
GSM147163 ATCC25404 wild type with R1drd19 LB 24hr biofilm cells
GSM147164 MG1655 wild type M9C glu 24hr biofilm cells
Relations
BioProject PRJNA98143

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE6923_RAW.tar 13.7 Mb (http)(custom) TAR (of CEL)
SRA Run SelectorHelp
Raw data provided as supplementary file
Processed data included within Sample table

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