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Series GSE68821 Query DataSets for GSE68821
Status Public on May 12, 2016
Title MLL1 and MLL fusion proteins play distinct roles in regulating MLLleukemic transcription program [ChIP-Seq]
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary This study describes the epigenetic profiling change of 1.) Mll1, WDR5 and H3K4me2 in mouse MAF9 leukemia cells treated with or without MM401; 2.) WDR5 and H3K4me2 epigenetic profiling in MLL1 flox/flox, ER-Cre+/- cells with knocking out MLL1 by 4OHT or not.
 
Overall design ChIP-Seq profile of Mll1, WDR5 and H3K4me2 were generated in MAF9 cells or MLL1 flox/flox, ER-cre+/- cells. A sequence profile of genomic DNA (Input) is also included.
 
Contributor(s) Dou Y, Xu J
Citation(s) 27462455
Submission date May 13, 2015
Last update date May 15, 2019
Contact name Yali Dou
E-mail(s) yalid@med.umich.edu
Phone (734) 615-1315
Organization name University of Michigan
Department Pathology Department
Lab 5215 Medical Science Building I
Street address 1301 Catherine Street
City Ann Arbor
State/province MI
ZIP/Postal code 48109
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (14)
GSM1682367 MAF9-DMSO-Input
GSM1682368 DMSO-MLL1
GSM1682369 DMSO-WDR5
This SubSeries is part of SuperSeries:
GSE68823 MLL1 and MLL fusion proteins play distinct roles in regulating MLLleukemic transcription program
Relations
BioProject PRJNA283891
SRA SRP058280

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE68821_RAW.tar 345.7 Mb (http)(custom) TAR (of BED, WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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