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Series GSE68654 Query DataSets for GSE68654
Status Public on May 08, 2015
Title CTCF and Smad signaling proteins and response to DPP
Organism Drosophila melanogaster
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq profiles for CTCF and TGF-beta signaling factors before and after treatment with DPP
Overall design Examination of transcription factor dynamics during signaling
Contributor(s) Van Bortle K, Takenaka N, Corces V
Citation(s) 26125535
Submission date May 07, 2015
Last update date May 15, 2019
Contact name Kevin Van Bortle
Organization name Stanford University
Department Genetics
Lab Michael Snyder
Street address 3165 Porter Dr
City Palo Alto
State/province CA
ZIP/Postal code 94043
Country USA
Platforms (1)
GPL13304 Illumina HiSeq 2000 (Drosophila melanogaster)
Samples (12)
GSM1678105 CTCF_DPP (treatment with decapentaplegic (DPP))
GSM1678106 dSmad2_control (untreated)
GSM1678107 dSmad2_CTCFkd (RNAi depletion of CTCF)
BioProject PRJNA283300
SRA SRP058097

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE68654_RAW.tar 390.0 Mb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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