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Status |
Public on Jul 04, 2007 |
Title |
Gene expression regulation of transporters and phase I/II metabolic enzymes in murine small intestine during fasting |
Organism |
Mus musculus |
Experiment type |
Expression profiling by array
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Summary |
Gene expression regulation of transporters and phase I/II metabolic enzymes in murine small intestine during fasting Keywords: metabolic state analysis
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Overall design |
Pure bred wild-type (129S1/SvImJ) and PPARα-null (129S4/SvJae) mice were maintained on AIN93M diet, and subsequently two sets of mice were fasted for 24 hours. The complete intestines were then removed and total RNA was isolated. In total 4 experimental groups were present: wild type and knockout mice that had free access to feed (AIN93M) before they were killed; wild type and knockout mice mice that were fasted for exactly 24 hours before they were killed. RNA of 3 biological replicates was hybridized to Affymetrix MOE430A arrays. Five microgram total RNA was labelled according to the ENZO protocol, fragmented and hybridized according to Affymetrix's protocols.
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Contributor(s) |
van den Bosch HM, Bunger M, van der Meijde J, Hooiveld GJ, Muller M |
Citation(s) |
17683626 |
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Submission date |
Jan 25, 2007 |
Last update date |
Jan 08, 2019 |
Contact name |
Guido Hooiveld |
E-mail(s) |
guido.hooiveld@wur.nl
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Organization name |
Wageningen University
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Department |
Div. Human Nutrition & Health
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Lab |
Nutrition, Metabolism & Genomics Group
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Street address |
HELIX, Stippeneng 4
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City |
Wageningen |
ZIP/Postal code |
NL-6708WE |
Country |
Netherlands |
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Platforms (1) |
GPL339 |
[MOE430A] Affymetrix Mouse Expression 430A Array |
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Samples (12)
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GSM124314 |
intestine_PPARa-knockout_control_rep1 |
GSM124315 |
intestine_PPARa-knockout_control_rep2 |
GSM124316 |
intestine_PPARa-knockout_control_rep3 |
GSM154795 |
intestine_PPARa_kockout_24hfasted_rep1 |
GSM154796 |
intestine_PPARa_kockout_24hfasted_rep2 |
GSM154797 |
intestine_PPARa_kockout_24hfasted_rep3 |
GSM154798 |
intestine_wildtype_24hfasted_rep1 |
GSM154799 |
intestine_wildtype_24hfasted_rep2 |
GSM154800 |
intestine_wildtype_24hfasted_rep3 |
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Relations |
BioProject |
PRJNA99113 |