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Series GSE68616 Query DataSets for GSE68616
Status Public on Oct 14, 2015
Title Complex transcriptional regulation and independent evolution of fungal-like traits in a relative of animals
Organism Creolimax fragrantissima
Experiment type Expression profiling by high throughput sequencing
Summary To understand the evolution of genome regulation and cell differentiation, we investigated the transcriptional dynamics of the ichthyosporean Creolimax fragrantissima, a close relative of animals that undergoes coenocytic development. We report the transcriptional differences between the amoeboid stage and the multinucleate stage of this species, describing the various aspects of differential genome regualtion found in those samples.
Overall design Examination of mRNA profiles from 2 stages of C. fragrantissima development.
Contributor(s) de Mendoza A, Ruiz-Trillo I
Citation(s) 26465111
Submission date May 06, 2015
Last update date May 15, 2019
Contact name Alex de Mendoza
Organization name Queen Mary University of London
Department School of Biological and Behavioural Sciences
Lab de Mendoza Lab
Street address Mile End Road. Fogg Building 5.14
City London
ZIP/Postal code E1 4NS
Country United Kingdom
Platforms (1)
GPL20162 Illumina HiSeq 2000 (Creolimax fragrantissima)
Samples (6)
GSM1677136 Amoeboid_1
GSM1677137 Amoeboid_2
GSM1677138 Amoeboid_3
BioProject PRJNA283212
SRA SRP058061

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE68616_Creolimax_fragrantissima.mRNA.fasta.gz 4.0 Mb (ftp)(http) FASTA
GSE68616_cfr_fpkm.tsv.gz 208.8 Kb (ftp)(http) TSV
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Raw data are available in SRA
Processed data are available on Series record

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