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Series GSE6825 Query DataSets for GSE6825
Status Public on Jan 22, 2007
Title Differential gene expression patterns in potassium-starved and Caesium-treated plants
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary At high concentrations ceasium (Cs) is toxic to plant growth. This toxic effect may occur when Cs blocks potassium (K) uptake mechanisms in plants. Consequently, plants starved of K and plants exposed to toxic concentrations of Cs should have similar gene expression patterns. To test this hypothesis, Arabidopsis will initially be grown on agar containing 1/10 MS salts before being transferred to either 1/10 MS nutrient solution (control plants), 1/10 MS nutrient solution containing 2 mM Cs, or 1/10 MS nutrient solution with no K. Roots and shoot will then be harvested seven days after transfer and used to challenge ATH1 GeneChips.
Experimenter name: John Hammond
Experimenter phone: 01789 470382
Experimenter fax: 01789 470552
Experimenter institute: Warwick University
Experimenter address: Horticulture Research International
Experimenter address: Wellesbourne
Experimenter address: Warwick
Experimenter zip/postal_code: CV35 9EF
Experimenter country: UK
Keywords: compound_treatment_design
Overall design 18 samples were used in this experiment
Contributor(s) Hammond J, White P, Townsend H, Emmerson Z, Schildknecht B
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Submission date Jan 22, 2007
Last update date Aug 28, 2018
Contact name Nottingham Arabidopsis Stock Centre (NASC)
Phone +44 (0)115 951 3237
Fax +44 (0)115 951 3297
Organization name Nottingham Arabidopsis Stock Centre (NASC)
Department School of Biosciences, University of Nottingham
Street address Sutton Bonington Campus
City Loughborough
ZIP/Postal code LE12 5RD
Country United Kingdom
Platforms (1)
GPL198 [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array
Samples (18)
GSM157311 Hammond_3-1_Control-shoot_Rep1_ATH1
GSM157312 Hammond_3-2_Potassium-starved-shoot_Rep1_ATH1
GSM157313 Hammond_3-3_Caesium-treated-shoot_Rep1_ATH1
BioProject PRJNA99145

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE6825_RAW.tar 40.7 Mb (http)(custom) TAR (of CEL)

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