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Series GSE67863 Query DataSets for GSE67863
Status Public on Dec 05, 2017
Title A lineage of myelolymphoblastic innate cells unmasked by inactivation of mTOR complex 1
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Blockades in hematopoiesis deprive the host of vital blood cells and frequently cause leukemia. Here we show that inactivation of mTORC1 in hematopoietic stem cells by deletion of Raptor unmasked a cell type, hereby called myelolymphoblastic innate cell (MLIC) based on unique gene expression signature, cell surface markers, morphology and functions. The MLICs are CD11b(+)Gr-1(-)B7-H1(high)F4/80(low) and have morphology of lymphoblasts with active Ig loci but no gene rearrangement. Within weeks of Raptor deletion, the MLICs account for nearly 50% of bone marrow cells and are found throughout both the lymphoid and non-lymphoid organs. Nevertheless, the MLICs are not malignant as they undergo very limited proliferation in vivo. Importantly, the MLICs broadly express pattern-recognition receptors and produce large amounts of inflammatory cytokines in response to all TLR ligands tested, rendering the host highly susceptible to pathogen-associated molecular patterns. Our data suggest that hematopoietic cell-intrinsic mTORC1 prevents development of self-destructive innate immune attack by suppressing generation of MLICs.
 
Overall design Raptor F/F mice were crossed with Mx1-Cre mice for more than 2 generations to get Raptor F/F (Ctrl) and Raptor F/F, Mx1-Cre (cKO) mice. Sex-matched 6-8 weeks old Ctrl mice and cKO mice were treated with polyinosinic: polycytidylic acid (pIpC) every other day for consecutive 7 times by intra-peritoneal (i.p.) injection to induce Cre expression and Raptor deletion in mouse hematopoietic system. Raptor mice were sacrificed 2-3 weeks after the last injection of pIpC. Whole BM cells from Raptor Ctrl mice (n=3) and FACS-sorted CD11b(+)Gr-1(-) BM MLICs from Raptor cKO mice (n=3) were used for RNA isolation and subsequent cDNA libraries construction. mRNA profiles of Ctrl-WBM and cKO-MLIC were examined by RNA-sequencing, in triplicate, using Illumina HiSeq 2000.
 
Contributor(s) Tang F, Zhang P, Cui Y, Zhang L, Jiang T, Liu Y, Zheng P
Citation(s) 29206103
NIH grant(s)
Grant ID Grant title Affiliation Name
R01 AG036690 mTOR, Inflammation and Senescence of Hematopoietic Stem Cells CHILDREN'S RESEARCH INSTITUTE Pan Zheng
R01 AI064350 Checkpoints in the cellular response to tissue injury CHILDREN'S RESEARCH INSTITUTE Pan Zheng
R01 CA171972 Targeted Elimination of Cancer Stem Cells for AML Therapy CHILDREN'S RESEARCH INSTITUTE Yang Liu
U01 CA183030 Therapeutic Elimination of Stem Cells for Relapsed Pediatric AML CHILDREN'S RESEARCH INSTITUTE Yang Liu
Submission date Apr 14, 2015
Last update date May 15, 2019
Contact name Yang Liu
E-mail(s) YaLiu@childrensnational.org
Phone 202-476-5849
Organization name Childrens' National Medical Center
Department Center for Cancer and Immunology Research
Lab Drs. Yang Liu and Pan Zheng's Lab
Street address 111 Michigan Ave NW
City Washington
State/province DC
ZIP/Postal code 20010
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (6)
GSM1657339 Ctrl-WBM rep1
GSM1657340 Ctrl-WBM rep2
GSM1657341 Ctrl-WBM rep3
Relations
BioProject PRJNA281089
SRA SRP057155

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE67863_RAW.tar 1.5 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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