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Series GSE67835 Query DataSets for GSE67835
Status Public on May 20, 2015
Title A survey of human brain transcriptome diversity at the single cell level
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We used single cell RNA sequencing on 466 cells to capture the cellular complexity of the adult and fetal human brain at a whole transcriptome level. Healthy adult temporal lobe tissue was obtained from epileptic patients during temporal lobectomy for medically refractory seizures. We were able to classify individual cells into all of the major neuronal, glial, and vascular cell types in the brain.
 
Overall design Examination of cell types in healthy human brain samples.
 
Contributor(s) Darmanis S, Enge M, Quake SR, Sloan SA, Barres BA, Zhang Y, Caneda C, Hayden Gephart MG, Shuer LM
Citation(s) 26060301
Submission date Apr 14, 2015
Last update date Mar 14, 2019
Contact name Martin Enge
E-mail martin.enge@ki.se
Organization name Karolinska Institute
Department Dep of Oncology-Pathology
Street address CCK, Z4
City Stockholm
ZIP/Postal code S-171 76
Country Sweden
 
Platforms (2)
GPL15520 Illumina MiSeq (Homo sapiens)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (466)
GSM1657871 healthy cortex cell 1
GSM1657872 healthy cortex cell 2
GSM1657873 healthy cortex cell 3
Relations
BioProject PRJNA281204
SRA SRP057196

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE67835_RAW.tar 30.7 Mb (http)(custom) TAR (of CSV)
Raw data are available in SRA
Processed data provided as supplementary file

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