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Series GSE67602 Query DataSets for GSE67602
Status Public on Sep 20, 2016
Title Single-cell RNA-seq of murine epidermis
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We used single-cell RNA sequencing to reveal how heterogeneity and plasticity of keratinocytes is tuned at the transcriptional level
 
Overall design We isolated and analyzed totally 1422 epidermal cells from dorsal telogen skin of C57BL/6 mice aged 56 +/-4 days. Sca1-microbeads were used to increase HF cell numbers and Sca1- (HF) and Sca1+ (mainly IFE) cell fractions were captured in a ratio of 2:1 on a microfluidic Fluidigm C1 system.
 
Contributor(s) Joost S, Zeisel A, Linnarsson S, Kasper M
Citation(s) 27641957
Submission date Apr 06, 2015
Last update date Mar 19, 2019
Contact name Sten Linnarsson
Organization name Karolinska Institutet
Department Medical Biochemistry and Biophysics
Lab Molecular Neurobiology
Street address Scheeles väg 1
City Stockholm
ZIP/Postal code 171 65
Country Sweden
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (1422)
GSM1650456 1772067055_A01
GSM1650457 1772067055_A03
GSM1650458 1772067055_A04
Relations
BioProject PRJNA280413
SRA SRP056902

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE67602_Joost_et_al_expression.txt.gz 4.4 Mb (ftp)(http) TXT
Raw data are available in SRA
Processed data is available on Series record

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