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| Status |
Public on Mar 31, 2015 |
| Title |
Genomewide measurements of whole embryo mRNA decay in Drosophila |
| Organism |
Drosophila melanogaster |
| Experiment type |
Expression profiling by array
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| Summary |
whole embryo (all tissues) measurement of mRNA decay by 4-thiouridine pulse-chase
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| Overall design |
These TU-Decay microarrays analyze mRNA levels at three timepoints: a one hour pulse, one hour chase, and three hour chase. Measurements with or without transcription inhibition by actinomycin D (ActD) were compared.
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| Contributor(s) |
Cleary M, Burow D |
| Citation(s) |
25896902 |
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| Submission date |
Mar 30, 2015 |
| Last update date |
Jul 02, 2015 |
| Contact name |
Michael Cleary |
| E-mail(s) |
mcleary4@ucmerced.edu
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| Organization name |
University of California, Merced
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| Department |
School of Natural Sciences
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| Street address |
5200 N. Lake Rd.
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| City |
Merced |
| State/province |
CA |
| ZIP/Postal code |
95343 |
| Country |
USA |
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| Platforms (1) |
| GPL6385 |
Agilent-018972 D. melanogaster (FruitFly) Oligo Microarray 4x44K G2519F (Feature Number version) |
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| Samples (6)
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| GSM1646776 |
whole embryo, uridine only chase, 1 hour pulse |
| GSM1646777 |
whole embryo, uridine only chase, 1 hour chase |
| GSM1646778 |
whole embryo, uridine only chase, 3 hour chase |
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| Relations |
| BioProject |
PRJNA279895 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE67435_Normalized_data_with_probename_and_annotation.txt.gz |
981.9 Kb |
(ftp)(http) |
TXT |
| GSE67435_RAW.tar |
13.5 Mb |
(http)(custom) |
TAR (of TXT) |
| Processed data included within Sample table |
| Processed data provided as supplementary file |
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