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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Apr 01, 2015 |
| Title |
A genome-wide CRISPR library for high-throughput genetic screening in Drosophila cells |
| Organisms |
Drosophila melanogaster; synthetic construct |
| Experiment type |
Other
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| Summary |
Analysis of sgRNA sequences in the raw library and at different time points after transfection into S2R+ cells
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| Overall design |
Two biological repeats of all samples at three timepoints post transfection, with three dilutions of library transfected.
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| Contributor(s) |
Liu JL, Kong L, Bassett A |
| Citation(s) |
26165496 |
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| Submission date |
Mar 26, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Ji-Long Liu |
| E-mail(s) |
jilong.liu@dpag.ox.ac.uk
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| Phone |
+44 (0)1865 285833
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| Organization name |
University of Oxford
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| Department |
MRC Functional Genomics Unit, Department of Physiology, Anatomy and Genetics
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| Street address |
South Parks Road
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| City |
Oxford |
| ZIP/Postal code |
OX1 3PT |
| Country |
United Kingdom |
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| Platforms (2) |
| GPL16479 |
Illumina MiSeq (Drosophila melanogaster) |
| GPL17769 |
Illumina MiSeq (synthetic construct) |
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| Samples (19)
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| GSM1645028 |
1:0 dilution, day 4, repeat 1 (2A) |
| GSM1645029 |
1:0 dilution, day 4, repeat 2 (2B) |
| GSM1645030 |
1:0 dilution, day 10, repeat 1 (3A) |
| GSM1645031 |
1:0 dilution, day 10, repeat 2 (3B) |
| GSM1645032 |
1:10 dilution, day 1, repeat 1 (4A) |
| GSM1645033 |
1:10 dilution, day 1, repeat 2 (4B) |
| GSM1645034 |
1:10 dilution, day 4, repeat 1 (5A) |
| GSM1645035 |
1:10 dilution, day 4, repeat 2 (5B) |
| GSM1645036 |
1:10 dilution, day 10, repeat 1 (6A) |
| GSM1645037 |
1:10 dilution, day 10, repeat 2 (6B) |
| GSM1645038 |
1:100 dilution, day 1, repeat 1 (7A) |
| GSM1645039 |
1:100 dilution, day 1, repeat 2 (7B) |
| GSM1645040 |
1:100 dilution, day 4, repeat 1 (8A) |
| GSM1645041 |
1:100 dilution, day 4, repeat 2 (8B) |
| GSM1645042 |
1:100 dilution, day 10, repeat 1 (9A) |
| GSM1645043 |
1:100 dilution, day 10, repeat 2 (9B) |
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| Relations |
| BioProject |
PRJNA279536 |
| SRA |
SRP056615 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE67339_metadata.txt.gz |
484 b |
(ftp)(http) |
TXT |
| GSE67339_sgRNA_counts.out.txt.gz |
1.7 Mb |
(ftp)(http) |
TXT |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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