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Series GSE66543 Query DataSets for GSE66543
Status Public on Apr 28, 2016
Title Proteasome machinery is instrumental in a common gain-of-function program of the p53 missense mutants in cancer
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Mutant p53 proteins, resulting from the missense mutations of the TP53 tumor suppressor gene, possess gain-of-function activities and are among the most robust oncoproteins in human tumors. They are potentially important therapeutic targets. To complement our mutant p53 transcriptomic studies we have performed ChIP-seq analysis in MDA-MB-231 (R280K) using the mouse anti-p53 DO1 antibody or control mouse IgG versus the input material.
 
Overall design ChIP-seq analysis was performed in MDA-MB-231 (R280K) using the mouse anti-p53 DO1 antibody (Santa Cruz Biotech.) and MDA-MB-231 (R280K) with mouse unspecific IgG antibody (Santa Cruz Biotech.) as negative control.
 
Contributor(s) Morelli MJ, Walerych D
Citation(s) 27347849
Submission date Mar 04, 2015
Last update date May 15, 2019
Contact name Marco J. Morelli
E-mail(s) Marco.Morelli@iit.it
Organization name Istituto Italiano di Tecnologia
Department Center for Genomic Science of IIT@SEMM
Street address via Adamello 16
City Milan
ZIP/Postal code 20139
Country Italy
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (3)
GSM1624706 MDA231_DO-1
GSM1624707 MDA231_Input
GSM1670920 MDA231_IgG
Relations
BioProject PRJNA277233
SRA SRP055837

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE66543_RAW.tar 240.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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