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Series GSE66037 Query DataSets for GSE66037
Status Public on Sep 01, 2015
Title Genome wide analysis of androgen-receptor binding sites and epigenetic condition in prostate cancer
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Prostate cancer is the most common cancer in men and AR downstream signalings promote prostate cancer cell proliferation. To investigate the AR signaling, we performed ChIP sequence analysis in AR positive prostate cancer cell line, LNCaP. In addition, we used hormone-refractory prostate cancer model cells, Bicalutamide-resistant (BicR) to explore the differences of androgen signaling in prostate cancer progression.
Overall design ChIP sequence analysis of AR binding sites and epigenetic condition in two prostate cancer cells
Contributor(s) Takayama K, Inoue S
Citation(s) 26404510
Submission date Feb 18, 2015
Last update date May 15, 2019
Contact name Ken-ichi Takayama
Organization name Tokyo Metropolitan Institute of Gerontology
Street address Sakaecho
City Itabashi-ku
ZIP/Postal code 173-0015
Country Japan
Platforms (2)
GPL10999 Illumina Genome Analyzer IIx (Homo sapiens)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (21)
GSM1613309 LNCaP Bicalutamide input
GSM1613310 LNCaP Bicaltamide ChIPed by AR
GSM1613311 BicR DHT input_1
This SubSeries is part of SuperSeries:
GSE66039 Global analysis of androgen-signaling reveals the function of miRNAs for the epigenomic regulation in prostate cancer cells
BioProject PRJNA275746
SRA SRP055133

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE66037_RAW.tar 6.5 Mb (http)(custom) TAR (of BED)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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