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Series GSE65348 Query DataSets for GSE65348
Status Public on Jun 17, 2015
Title Differential expression between Sh2b3 knockout and wild type mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To validate the predicted Sh2b3 derived gene regulatory subnetwork using integrative network approach in human population study, we examined the gene expression levels of whole blood in WT (wild-type) and Sh2b3-/- mice by RNA sequencing, and identified the differentially expressed genes.
 
Overall design RNA sequencing whole blood samples from 4 WT and 4 Sh2b3-/- mice.
 
Contributor(s) Levy D, Madhur MS, Courchesne P, Huan T
Citation(s) 25882670
Submission date Jan 27, 2015
Last update date May 15, 2019
Contact name Daniel Levy
E-mail(s) Levyd@nih.gov
Organization name NHLBI
Department Framingham Heart Study
Street address 73 Mt. Wayte Avenue, Suite 2
City Framingham
State/province MA
ZIP/Postal code 01702
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (8)
GSM1593007 Wild type sham 1
GSM1593008 Wild type sham 2
GSM1593009 Wild type sham 3
Relations
BioProject PRJNA273746
SRA SRP052872

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE65348_RAW.tar 5.9 Mb (http)(custom) TAR (of FPKM_TRACKING)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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