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Series GSE64397 Query DataSets for GSE64397
Status Public on May 27, 2015
Title Determinants of nucleosome positioning and their influence on plant gene expression
Organism Arabidopsis thaliana
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary We report the global nuclesome posiitons to study the relationship between nucleosome occupancy and gene expression in response to Coronatine in Arabidopsis
 
Overall design We examined nucleosome occupancy and mRNA abundance in response to Coronatine in Arabidopsis rosette leaves
 
Contributor(s) Liu M, Shiu S
Citation(s) 26063739
Submission date Dec 19, 2014
Last update date May 15, 2019
Contact name Ming-Jung Liu
E-mail(s) mjliu@gate.sinica.edu.tw
Organization name Academia sinica
Street address 128 Sec. 2, Academia Rd, Nankang
City Taipei
ZIP/Postal code 11529
Country Taiwan
 
Platforms (1)
GPL17639 Illumina HiSeq 2500 (Arabidopsis thaliana)
Samples (9)
GSM1570244 RNA-seq_control_1
GSM1570245 RNA-seq_control_2
GSM1570246 RNA-seq_COR_1
Relations
BioProject PRJNA270886
SRA SRP051400

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE64397_Processed_data_RNA-expression.txt.gz 459.3 Kb (ftp)(http) TXT
GSE64397_Processed_data_nucleosome_occupancy.txt.gz 372.0 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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