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| Status |
Public on Oct 04, 2016 |
| Title |
Genome-wide maps of chromatin state of WDR5 and KAT2A in gastric cancer BGC823 cells [ChIP-seq] |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
we performed ChIP coupled with high-throughput sequencing (ChIP-seq) for WDR5 and KAT2A in BGC823 cells. WDR5 and KAT2A ChIP-Seq data analysis revealed 5449 and 6485 called peaks, respectively in BGC823 cells with control shRNA transfection.
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| |
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| Overall design |
Examination of WDR5 and KAT2A genomic bingding efficiency and histone modifications pattern change in gastri cancer cell BGC823 cells after downregulation of GAS1 expression.
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| |
|
| Contributor(s) |
Chen H |
| Citation(s) |
27147598 |
| |
| Submission date |
Dec 02, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
Haoyan Chen |
| Organization name |
Renji Hospital
|
| Street address |
145 Shandong Road
|
| City |
Shanghai |
| State/province |
Shanghai |
| ZIP/Postal code |
200001 |
| Country |
China |
| |
|
| Platforms (1) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
|
| Samples (9)
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| This SubSeries is part of SuperSeries: |
| GSE63765 |
ChIP-seq and RNA-seq in BGC823 cells after downregulation of GAS1 expression |
|
| Relations |
| BioProject |
PRJNA269028 |
| SRA |
SRP050421 |
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