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Series GSE63229 Query DataSets for GSE63229
Status Public on Dec 01, 2018
Title Expression profile of Ras, MEK and ERK inhibited 16HBE bronchial epithelial cells
Organism Homo sapiens
Experiment type Expression profiling by array
Summary To identify Ras, MEK and ERK target genes which regulate tight junction formation in 16HBE bronchial epithelial cells
 
Overall design 16HBE cells were stably infected with pQCXIP retroviral vector, or pQCXIP expressing dominant negative Ras (DN Ras). pQCXIP cells were treated with DMSO (control), 500nM GSK1120212 (MEK inhibitor) or 1uM SCH772984 (ERK inhibitor) for 4 days, then total RNA was extracted. 4 samples were harvested per experiment: pQCXIP/DMSO, pQCXIP/MEKi, pQCXIP/ERKi, pQCXIP.DN Ras. This was repeated in 3 independent experiments. Gene expression was compared to the pQCXIP/DMSO control.
 
Contributor(s) Durgan J, Tao G, Walters MS, Florey O, Schmidt A, Arbelaez V, Rosen N, Crystal RG, Hall A
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Nov 12, 2014
Last update date Dec 02, 2018
Contact name Jeffrey Zhao
Organization name Memorial Sloan Kettering Cancer Center
Department Genomics Core
Street address 1275 York Avenue
City New York
State/province NY
ZIP/Postal code 10065
Country USA
 
Platforms (1)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
Samples (12)
GSM1544081 16HBE-pQCXIP/DMSO-n1
GSM1544082 16HBE-pQCXIP/DMSO-n2
GSM1544083 16HBE-pQCXIP/DMSO-n3
Relations
BioProject PRJNA267018

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE63229_Non-normalized_data.txt.gz 6.5 Mb (ftp)(http) TXT
GSE63229_RAW.tar 26.2 Mb (http)(custom) TAR
Processed data included within Sample table

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