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Series GSE62371 Query DataSets for GSE62371
Status Public on Feb 01, 2015
Title miRNA expression profiling of primary melanoma tumors (cohort II)
Platform organism synthetic construct
Sample organism Homo sapiens
Experiment type Non-coding RNA profiling by array
Summary We performed global microRNA expression profiling of a cohort of primary melanoma patient samples linked to a well-annotated clinical database. The goal of this study was to identify microRNA that are associated to or correlated with various clinical parameters and patient outcomes. Candidate microRNA were identified for building prognostic models and functional testing.
 
Overall design 119 primary melanoma samples were analyzed in two color arrays. The reference sample used was an equal combination of all samples analyzed. By this design, ratio data of test sample/reference is mean-centered data.
 
Contributor(s) Hernando E, Hanniford DS, Zhong J
Citation(s) 25677173, 26089374
Submission date Oct 15, 2014
Last update date Dec 16, 2015
Contact name Eva Hernando-Monge
E-mail(s) Eva.Hernando-Monge@nyumc.org
Phone 212-263-9054
Organization name NYU Langone Medical Center
Street address 550 1st Ave. Smilow 305
City New York
State/province NY
ZIP/Postal code 10016
Country USA
 
Platforms (1)
GPL19296 Exiqon miRCURY LNA array 6th gen - hsa, mmu & rno miRBASE version 16.0
Samples (119)
GSM1526020 Primary Melanoma_001
GSM1526021 Primary Melanoma_002
GSM1526022 Primary Melanoma_003
This SubSeries is part of SuperSeries:
GSE62372 miRNA expression profiling of primary melanoma tumors
Relations
BioProject PRJNA263929

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE62371_RAW.tar 257.1 Mb (http)(custom) TAR (of TXT)
Raw data provided as supplementary file
Processed data included within Sample table

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