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Series GSE61210 Query DataSets for GSE61210
Status Public on Oct 16, 2014
Title Swi/Snf dynamics on stress responsive genes is governed by competitive bromodomain interactions.
Organism Saccharomyces cerevisiae
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Acetylation of Snf2 regulates Swi/Snf recruitment during stress
Overall design ChIP was done for Snf2 in unstressed and stressed condition fro WT, Snf2 K1493R K1497R, Wt delta bromodomain, Snf2 K1493R K1497R delta bromodomain using Snf2 antibodies,
Mnase-seq was done for Snf2 in unstressed and stressed condition fro WT, Snf2 K1493R K1497R
Contributor(s) Dutta A, Workman JL, Gogol M
Citation(s) 25319830
Submission date Sep 08, 2014
Last update date May 15, 2019
Contact name Madelaine Gogol
Organization name Stowers Institute
Department Computational Biology Core
Street address 1000 E. 50th Street
City Kansas City
State/province MO
ZIP/Postal code 64110
Country USA
Platforms (2)
GPL13821 Illumina HiSeq 2000 (Saccharomyces cerevisiae)
GPL17143 Illumina MiSeq (Saccharomyces cerevisiae)
Samples (56)
GSM1499583 WT unstressed rep1 Snf2 C'ab
GSM1499584 WT unstressed rep2 Snf2 C'ab
GSM1499585 WT stressed rep1 Snf2 C'ab
BioProject PRJNA260510
SRA SRP046340

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Supplementary file Size Download File type/resource
GSE61210_RAW.tar 4.6 Gb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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