NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE61115 Query DataSets for GSE61115
Status Public on Dec 01, 2015
Title 4C-seq analysis of the BX-C in S2 cells and cells expressing wild type or SAM mutant Polyhomeotic
Organism Drosophila melanogaster
Experiment type Other
Summary 4C-seq analysis using three viewpoint sequences in the Drosophila Bithorax Complex of Hox genes. 4C contacts were compared among S2 cells and those expressing wild type or SAM mutant Ph.
 
Overall design Two replicates from each cell line for each of three viewpoints were carried out. 6 samples per lane were sequenced.
 
Citation(s) 26759081
Submission date Sep 04, 2014
Last update date May 15, 2019
Contact name Nicole Francis
Organization name IRCM/University of Montreal
Street address 110 Ave des Pins Ouest
City Montreal
State/province Quebec
ZIP/Postal code H2X 2L3
Country Canada
 
Platforms (1)
GPL17275 Illumina HiSeq 2500 (Drosophila melanogaster)
Samples (18)
GSM1496926 Abdb_bc1_r1
GSM1496927 Abdb_bc2_r1
GSM1496928 Abdb_bc3_r1
Relations
BioProject PRJNA260281
SRA SRP046240

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE61115_RAW.tar 50.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap