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| Status |
Public on Aug 12, 2016 |
| Title |
p63 binding regions in HaCaT epidermal keratinocyte infected with caRAS/dnRAS and treated with TGF-beta |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
We evaluated the effect of caRAS/dnRAS expression and TGF-beta on p63 binding in HaCaT cells.
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| Overall design |
p63 binding sites in HaCaT cells were determined by ChIP-seq.
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| Contributor(s) |
Vasilaki E, Morikawa M, Koinuma D, Mizutani A, Hirano Y, Ehata S, Sundqvist A, Aburatani H, Moustakas A, Heldin C, Miyazono K |
| Citation(s) |
27555661 |
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| Submission date |
Aug 27, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
Daizo Koinuma |
| E-mail(s) |
d-koinuma@umin.ac.jp
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| Organization name |
University of Tokyo
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| Department |
Pathology
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| Street address |
Hongo 7-3-1, Bunkyo-ku
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| City |
Tokyo |
| ZIP/Postal code |
113-0033 |
| Country |
Japan |
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| Platforms (1) |
| GPL10999 |
Illumina Genome Analyzer IIx (Homo sapiens) |
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| Samples (5)
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| This SubSeries is part of SuperSeries: |
| GSE60814 |
Ras and TGF-beta signaling aggravates the metastatic and invasive potential of cancer cells through activation of the deltaNp63 alpha transcriptional program |
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| Relations |
| BioProject |
PRJNA259609 |
| SRA |
SRP045807 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE60812_RAW.tar |
754.9 Mb |
(http)(custom) |
TAR (of BED, WIG) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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