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Series GSE60343 Query DataSets for GSE60343
Status Public on Feb 20, 2015
Title Inhibition of Pseudomonas aeruginosa swarming motility by 1-naphthol and other bicyclic compounds bearing hydroxyl group.
Organism Pseudomonas aeruginosa PAO1
Experiment type Expression profiling by genome tiling array
Summary Many bacteria convert bicyclic compounds, such as indole and naphthalene, to oxidized compounds, including hydroxyindoles and naphthols. Pseudomonas aeruginosa, a ubiquitous bacterium that inhabits diverse environments, shows pathogenicity against animals, plants and other microorganisms, and increasing evidence has shown that several bicyclic compounds alter the virulence-related phenotypes of P. aeruginosa. Here, we revealed that hydroxyindoles (4- and 5-hydroxyindoles) and naphthalene derivatives bearing hydroxyl groups specifically inhibit swarming motility but have minor effects on other motilities, including swimming and twitching, in P. aeruginosa. Further analyses using 1-naphthol showed that this effect is also associated with clinically isolated hyper swarming P. aeruginosa cells. Swarming motility is associated with the dispersion of cells from biofilms, and the addition of 1-naphthol maintained biofilm biomass without cell dispersion. Swarming inhibition did not mediate rhamnolipid production, which regulates swarming motility in P. aeruginosa. Transcriptome analyses revealed that 1-naphthol increases gene expression associated with multidrug efflux and represses gene expression associated with aerotaxis and pyochelin, flagellar, and pili synthesis. In the present study, we showed that several bicyclic compounds bearing hydroxyl groups inhibit the swarming motility of P. aeruginosa, and these results provide new insight into the chemical structures that inhibit the specific phenotypes of P. aeruginosa.
 
Overall design In total 4 samples: gene expressions of P. aeruginosa with (2 samples) or without (2 samples) 1-naphthol
 
Contributor(s) Oura H, Tashiro Y, Toyofuku M, Ueda K, Kiyokawa T, Ito S, Takahashi Y, Lee S, Nojiri H, Nakajima-Kambe T, Uchiyama H, Futamata H, Nomura N
Citation(s) 25681177
Submission date Aug 12, 2014
Last update date May 07, 2015
Contact name Yosuke Tashiro
Organization name Shizuoka University
Department Graduate School of Engineering, Department of Applied Chemistry and Biochemical Engineering
Street address 3-5-1 Johoku Naka-ku
City Hamamatsu
State/province Shizuoka
ZIP/Postal code 433-8125
Country Japan
 
Platforms (1)
GPL8297 Pseudomonas aeruginosa PAO1 chromosome array
Samples (2)
GSM1474092 PAO1 (Control)
GSM1474093 PAO1 (1-naphthol)
Relations
BioProject PRJNA258070

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE60343_RAW.tar 90.5 Mb (http)(custom) TAR (of BAR, CEL)
Processed data provided as supplementary file

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