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Series GSE60024 Query DataSets for GSE60024
Status Public on Aug 03, 2014
Title ChIP-seq of RNA polymerase II, transcription factors and histone modification in retinal pigment epithelial cells
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Retinal pigment epithelial cells are critical for eye function and loss of cell function is linked to age-related blindness.  Relatively little is known about the transcriptional regulatory networks in these cells.  The datasets presented here are ChIP-seq experiments for RNA polymerase II , transcription factors and histone modifications in human retinal pigment epithelial cells.
 
Overall design ChIP-Seq for transcription factors, RNA polymerase, histone modifications and CTCF in retinal pigment epithelial cells
 
Contributor(s) Alessio AD, Young RA
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Submission date Aug 01, 2014
Last update date May 15, 2019
Contact name Richard A Young
E-mail(s) young_computation@wi.mit.edu
Phone 617-258-5219
Organization name Whitehead Institute for Biomedical Research
Lab Young Lab
Street address 9 Cambridge Center
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (13)
GSM1463915 RPE-WCE(2)_ChipSeq
GSM1463916 RPE-H3K27ac_ChipSeq
GSM1463917 RPE-WCE(3)_ChipSeq
Relations
BioProject PRJNA257297
SRA SRP045185

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE60024_RAW.tar 6.5 Mb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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