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Series GSE59752 Query DataSets for GSE59752
Status Public on Apr 14, 2015
Title Transcription factor binding in liver tissue isolated from WT and GRdim mice
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We report ChIP-seq and ChIP-exo data for GR in liver tissue isolated from WT and GRdim mice. Comparison of the mouse models reveals that GR interacts with the genome as both a monomer and dimer.
 
Overall design Examination of GR, RNAPII and CEBPb binding in WT and GRdim mice on a genome-wide scale
 
Contributor(s) Lim H, Steger D
Citation(s) 25957148
Submission date Jul 24, 2014
Last update date May 15, 2019
Contact name Hee-Woong Lim
Organization name Cincinnati Children's Hospital Medical Center
Department Division of Biomedical Informatics
Street address 3333 Burnet Ave. MLC 7024
City Cincinnati
State/province Ohio
ZIP/Postal code 45229
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (29)
GSM1446062 ChIP-seq, Liver_GR_GRdim_6am
GSM1446063 ChIP-seq, Liver_GR_GRdim_6pm
GSM1446064 ChIP-seq, Liver_GR_GRdim_pred_6am
Relations
BioProject PRJNA256167
SRA SRP044839

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE59752_RAW.tar 6.7 Mb (http)(custom) TAR (of BED, TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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