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| Status |
Public on Jul 23, 2014 |
| Title |
Transcriptome maps of mRNP biogenesis factors define pre-mRNA recognition |
| Organism |
Saccharomyces cerevisiae |
| Experiment type |
Other
|
| Summary |
Biogenesis of eukaryotic messenger ribonucleoprotein complexes (mRNPs) involves the synthesis, splicing, and 3’-processing of pre-mRNA, and the assembly of mature mRNPs for nuclear export. We mapped 23 mRNP biogenesis factors onto the newly synthesized yeast transcriptome, providing ~10^5-10^6 high-confidence RNA interaction sites per factor.
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| |
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| Overall design |
PAR-CLIP data of 23 mRNP biogenesis factors in Saccharomyces cerevisiae
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| |
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| Contributor(s) |
Bäjen C, Torkler P |
| Citation(s) |
25192364 |
| Submission date |
Jul 22, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
Carlo Bäjen |
| E-mail(s) |
carlo.baejen@mpibpc.mpg.de
|
| Organization name |
Max Planck Institute for Biophysical Chemistry
|
| Department |
Molecular Biology
|
| Lab |
Prof. Patrick Cramer
|
| Street address |
Am Fassberg 11
|
| City |
Göttingen |
| ZIP/Postal code |
37077 |
| Country |
Germany |
| |
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| Platforms (2) |
| GPL13272 |
Illumina Genome Analyzer IIx (Saccharomyces cerevisiae) |
| GPL18085 |
Illumina HiSeq 1500 (Saccharomyces cerevisiae) |
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| Samples (23)
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| Relations |
| BioProject |
PRJNA255917 |
| SRA |
SRP044716 |
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