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Series GSE59209 Query DataSets for GSE59209
Status Public on Apr 30, 2015
Title Genome wide expession analysis of effect of Batf2 knock down in bone marrow derived macrophage cells stimulated with IFNg
Organism Mus musculus
Experiment type Expression profiling by array
Summary Bmdm cells were differentiated for 10 days and harvested and culture in six well plate followed by transfection with Batf2 ShRNA.
Media was replanished in every two days and on 10th day cells were stimulated with IFNg for 4 hrs. Total RNA was obtain after 4 hrs of stimulation.
 
Overall design Total RNA was colloected from control ShRNA transfected Bmdm cells and Batf2 shRNA transfected Bmdm cells stimulated with/with out IFNg
 
Contributor(s) Suzuki H, Roy S
Citation(s) 25957166
Submission date Jul 08, 2014
Last update date Jan 16, 2019
Contact name Harukazu Suzuki
Organization name Riken yokohama, Riken center for life science technology
Department Division of genomic technology
Street address 1-7-22 Suehiro-Cho, Tsurumi-Ku,
City Yokohama
ZIP/Postal code 230-0045
Country Japan
 
Platforms (1)
GPL6887 Illumina MouseWG-6 v2.0 expression beadchip
Samples (12)
GSM1430670 unstimulated_rep1
GSM1430671 IFNg_rep1
GSM1430672 Batf2_KD_rep1
This SubSeries is part of SuperSeries:
GSE59210 Genome wide expression analysis of bone marrow derived macrophage cells (BMDMs) stimulated with IFNg and effect of Batf2 knockdown in BMDMs stimulated with IFNg
Relations
BioProject PRJNA254729

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE59209_RAW.tar 15.8 Mb (http)(custom) TAR
GSE59209_non-normalized_batf2_IFNg_kD.txt.gz 6.7 Mb (ftp)(http) TXT
GSE59209_normalized_annotated_batf2IFNg_kd_1.txt.gz 1.6 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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