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Series GSE58802 Query DataSets for GSE58802
Status Public on Jun 01, 2016
Title Prep1 and Meis1 competition for Pbx1 binding regulates protein stability and tumorigenesis [hP]
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Prep1 is a tumor-suppressor, whereas Meis1 is an oncogene. We show that to perform these activities in MEFs both proteins competitively hetero-dimerize with Pbx1. Meis1 alone transforms Prep1-deficient fibroblasts while Prep1 overexpression inhibits Meis1 tumorigenicity. Pbx1 can therefore alternatively act as oncogene or tumor-suppressor. Prep1 post-translationally controls the level of Meis1 decreasing its stability by sequestering Pbx1. The different levels of Meis1 and the presence of Prep1 are followed at the transcriptional level by the induction of specific transcriptional signatures. The decrease of Meis1 prevents Meis1 interaction with Ddx3x and Ddx5, which are essential for Meis1 tumorigenesis, and modifies the growth promoting DNA binding landscape of Meis1 to the growth controlling landscape of Prep1. Hence the key feature of Prep1 tumor inhibiting activity is the control of Meis1 stability.
 
Overall design Examination of Prep1 and Meis1 in two cell types
 
Contributor(s) Dardaei L, Blasi F
Citation(s) 24578510
Submission date Jun 25, 2014
Last update date May 15, 2019
Contact name Francesco Blasi
E-mail(s) francesco.blasi@ifom.eu
Organization name IFOM
Street address Via Adamello 16
City Milan
ZIP/Postal code 20139
Country Italy
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (6)
GSM1419806 Meis1/2_ChIPSeq_WT
GSM1419807 Prep1_ChIPSeq_WT
GSM1419808 Meis1/2_ChIPSeq_hP
This SubSeries is part of SuperSeries:
GSE82135 Prep1 and Meis1 competition for Pbx1 binding regulates protein stability and tumorigenesis
Relations
BioProject PRJNA253530
SRA SRP043551

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Supplementary file Size Download File type/resource
GSE58802_RAW.tar 2.3 Gb (http)(custom) TAR (of BED, WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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