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Series GSE58661 Query DataSets for GSE58661
Status Public on Jun 19, 2014
Title 89 NSCLC patients with gene expression profiles and matching CT imaging data available at TCIA.
Organism Homo sapiens
Experiment type Expression profiling by array
Summary The Lung3 data set consists of 89 NSCLC patients that were treated at MAASTRO Clinic, The Netherlands. For these patients pretreatment CT scans, tumour delineations and gene expression profiles were available. We used this data set to associate imaging features with gene-expression profiles.
 
Overall design 89 samples from NSCLC patients. Samples were obtained by biopsies from cancerous tissue. Tumors were classified as Adenocarcinoma, Papillary, NOS; Squamous Cell Carcinoma, NOS; Non-Small Cell; Papillary Type; or Solid Type.
 
Contributor(s) Aerts HJ, Grossmann P
Citation(s) 24892406, 28731408
Submission date Jun 19, 2014
Last update date Jun 05, 2019
Contact name Patrick Grossmann
E-mail(s) PATRICK@JIMMY.HARVARD.EDU
Organization name Dana-Farber Canacer Institute
Department Radiation Oncology
Lab Aerts Lab
Street address 450 Brookline Ave
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platforms (1)
GPL15048 Rosetta/Merck Human RSTA Custom Affymetrix 2.0 microarray [HuRSTA_2a520709.CDF]
Samples (89)
GSM1416528 lung_1
GSM1416529 lung_2
GSM1416530 lung_3
Relations
BioProject PRJNA253120

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE58661_RAW.tar 438.7 Mb (http)(custom) TAR (of CEL)
Raw data provided as supplementary file
Processed data included within Sample table

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