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Series GSE58607 Query DataSets for GSE58607
Status Public on Sep 30, 2014
Title CK2 regulates transcriptional elongation
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary CK2 binds to actively transcribed regions in the genome and regulates transcriptional elongation.
Overall design Identification of genome-wide binding sites of CK2α, and examination of the effect of Pol II binding upon CK2 inhibition in LNCaP cells
Contributor(s) Rosenfeld MG, Basnet H
Citation(s) 25252977
Submission date Jun 18, 2014
Last update date May 15, 2019
Contact name Yuliang Tan
Organization name University of California, San Diego
Department School of Medicine
Street address Room 345, CMM West, 9500 Gilman Drive, Mail Code 0648
City La Jolla
State/province California
ZIP/Postal code 92037-0648
Country USA
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (3)
GSM1415123 hs46l4_2_CK2a+DHT
GSM1415124 hs52l3_4_PolII+DHT
GSM1415125 hs52l3_6_PolII+TBBZ+DHT
BioProject PRJNA253055
SRA SRP043385

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE58607_RAW.tar 532.7 Mb (http)(custom) TAR (of BED, BEDGRAPH)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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