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Series GSE58607 Query DataSets for GSE58607
Status Public on Sep 30, 2014
Title CK2 regulates transcriptional elongation
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary CK2 binds to actively transcribed regions in the genome and regulates transcriptional elongation.
 
Overall design Identification of genome-wide binding sites of CK2α, and examination of the effect of Pol II binding upon CK2 inhibition in LNCaP cells
 
Contributor(s) Rosenfeld MG, Basnet H
Citation(s) 25252977
Submission date Jun 18, 2014
Last update date May 15, 2019
Contact name Yuliang Tan
E-mail(s) yut020@ucsd.edu
Organization name University of California, San Diego
Department School of Medicine
Street address Room 345, CMM West, 9500 Gilman Drive, Mail Code 0648
City La Jolla
State/province California
ZIP/Postal code 92037-0648
Country USA
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (3)
GSM1415123 hs46l4_2_CK2a+DHT
GSM1415124 hs52l3_4_PolII+DHT
GSM1415125 hs52l3_6_PolII+TBBZ+DHT
Relations
BioProject PRJNA253055
SRA SRP043385

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE58607_RAW.tar 532.7 Mb (http)(custom) TAR (of BED, BEDGRAPH)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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