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Series GSE58593 Query DataSets for GSE58593
Status Public on Aug 06, 2015
Title Dynamics of tolerant potato-potato virus Y interaction
Organism Solanum tuberosum
Experiment type Expression profiling by array
Summary Time series response of potato cv. Désirée, which is tolerant to PVY infection, was analysed in both inoculated as well as upper non-inoculated leaves. Additionally, transgenic plants deficient in accumulation of salicylic acid (NahG- Désirée) were studied in the same setting.
 
Overall design 2 genotypes, mock and virus inoculated plants, inoculated (1-7dpi) and non-inoculated (1-11 dpi) leaves; one-colour design
 
Contributor(s) Stare T, Ramšak Ž, Stare K, Gruden K
Citation(s) 26386579, 29934298
Submission date Jun 17, 2014
Last update date Jun 12, 2019
Contact name Ziva Ramsak
E-mail(s) ziva.ramsak@nib.si
Organization name National Institute of Biology
Department Department of Biotechnology and Systems Biology
Street address Večna pot 111
City Ljubljana
ZIP/Postal code 1000
Country Slovenia
 
Platforms (1)
GPL14365 Agilent-015425 PSUMAC-Solanum tuberosum-44K (Probe Name version)
Samples (118)
GSM1414614 Désirée_1dpi_mock_bottomLeaf_rep1
GSM1414615 Désirée_1dpi_mock_bottomLeaf_rep2
GSM1414616 Désirée_1dpi_mock_bottomLeaf_rep3
Relations
BioProject PRJNA252955

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE58593_RAW.tar 879.6 Mb (http)(custom) TAR (of TXT)
Raw data provided as supplementary file
Processed data included within Sample table

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