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Series GSE58428 Query DataSets for GSE58428
Status Public on Nov 14, 2014
Title Genome wide mapping of AR and its associated factors in prostate cancer
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Prostate cancer is the most common cancer in men and AR downstream signalings promote prostate cancer cell proliferation.We performed ChIP-seq analysis to investigate the role of AR and its associated factors such as coregulators or collaborating factors.In addition, by siRNA mediated knockdown of such factors, changes of AR-binding sites in prostate cancer cells were analyzed.
Overall design ChIP-sequence analysis of AR and its associated factors in prostate cancer cells
Contributor(s) Takayama K, Inoue S
Citation(s) 25228652
Submission date Jun 12, 2014
Last update date May 15, 2019
Contact name Ken-ichi Takayama
Organization name Tokyo Metropolitan Institute of Gerontology
Street address Sakaecho
City Itabashi-ku
ZIP/Postal code 173-0015
Country Japan
Platforms (2)
GPL10999 Illumina Genome Analyzer IIx (Homo sapiens)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (30)
GSM1410762 lncap_dht10nM_1h_CTBP1
GSM1410763 lncap_dht10nM_24h_CTBP2
GSM1410764 lncap_EtOH_1h_CTBP1
BioProject PRJNA252585
SRA SRP043185

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE58428_RAW.tar 8.9 Mb (http)(custom) TAR (of BED)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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