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Series GSE58337 Query DataSets for GSE58337
Status Public on Jun 09, 2014
Title Conservation of transcription start sites within genes across a bacterial genus
Organisms Shewanella sp. MR-4; Shewanella sp. MR-7; Shewanella sp. ANA-3; Shewanella oneidensis MR-1; Shewanella putrefaciens CN-32; Shewanella loihica PV-4; Shewanella amazonensis SB2B; Shewanella sp. W3-18-1
Experiment type Expression profiling by genome tiling array
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
Overall design Refer to individual Series
Citation(s) 24987095
Submission date Jun 09, 2014
Last update date May 15, 2019
Contact name Wenjun Shao
Organization name University of California
Department Molecular and Cell Biology
Lab Adam Arkin
Street address 2151 Berkeley Way
City Berkeley
State/province CA
ZIP/Postal code 94704-5230
Country USA
Platforms (10)
GPL16797 Custom NimbleGen Shewanella oneidensis MR-1 Tiling v2 [NimbleGen_MR1_2005K_1]
GPL16835 Illumina HiSeq 2000 (Shewanella sp. ANA-3)
GPL16836 Illumina HiSeq 2000 (Shewanella putrefaciens CN-32)
Samples (26)
GSM1099266 LB
GSM1099267 DMSO
GSM1099268 FE
This SuperSeries is composed of the following SubSeries:
GSE45217 Transcript map of Shewanella oneidensis MR-1
GSE45311 Transcript structures in Shewanella sp ANA-3
GSE45312 Transcript structures in Shewanella putrefaciens CN-32
BioProject PRJNA252019

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE58337_RAW.tar 184.2 Mb (http)(custom) TAR (of FTR, WIG)

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