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Series GSE57125 Query DataSets for GSE57125
Status Public on Jan 01, 2016
Title Macrophage Precursor Cells from the Left Atrial Appendage of the Adult Heart Spontaneously Reprogram into a C-kit+/CD45- Stem Cell-Like Phenotype [RNA-Seq]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The developmental origin of the c-kit expressing progenitor cell pool in the adult heart has remained elusive. Recently, it has been discovered that the injured heart is enriched with c-kit+ cells, which also express the hematopoietic marker CD45. In this study, we characterize the phenotype and transcriptome of the c-kit+/CD45+ cell population, originating from the left atrial appendage. These cells are defined as cardiac macrophage progenitors. We also demonstrate that the c-kit+/CD45+ progenitor cell population activates heart development, neural crest and pluripotency associated pathways in vitro, in conjunction with CD45 down-regulation, and acquire a c-kit+/lin- phenotype. This spontaneous reprogramming progresses further to a highly proliferative, partially myogenic phenotype. Our data suggests that c-kit+/lin- cells and cardiac macrophages have a common lineage origin possibly resolving some current conundrums in the field of cardiac regeneration.
 
Overall design Two different stem cell types were grown by altering the tissue digestion protocol, from which one type was spontaneously transdifferentiating to other cell types. To investigate their transcriptional profiles we prepared RNA from two cell sorted replicates per cell type (A, B, C1, C2, C3).
 
Contributor(s) Leinonen JV, Beeri R
Citation(s) 26913371
Submission date Apr 28, 2014
Last update date May 15, 2019
Contact name Jussi Leinonen
E-mail(s) jussi.leinonen@mac.com
Organization name Hadassah-Hebrew University Medical Center
Department Cardiovascular Research Center, Heart Institute
Street address Kiryat Hadassah p.o.b 12000
City Jerusalem
ZIP/Postal code 91120
Country Israel
 
Platforms (1)
GPL16417 Illumina MiSeq (Mus musculus)
Samples (10)
GSM1375643 A -type cell (rep 1)
GSM1375644 A -type cell (rep 2)
GSM1375645 B -type cell (rep 1)
This SubSeries is part of SuperSeries:
GSE57126 Macrophage Precursor Cells from the Left Atrial Appendage of the Adult Heart Spontaneously Reprogram into a C-kit+/CD45- Stem Cell-Like Phenotype
Relations
BioProject PRJNA245514
SRA SRP041498

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Supplementary file Size Download File type/resource
GSE57125_Normalized.txt.gz 2.1 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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