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Series GSE56863 Query DataSets for GSE56863
Status Public on Apr 17, 2014
Title Effect of MiSSP7 overexpression on the Poplar root transcriptome
Platform organism Populus trichocarpa
Sample organism Populus tremula x Populus alba
Experiment type Expression profiling by array
Summary The Poplar transcriptome was analyzed in Populus tremulaxPopulus alba clone 717-1B4 control roots and in two poplar lines overexpressing MiSSP7.
 
Overall design We performed 9 hybridizations (NimbleGen) with samples derived from Populus tremulaxPopulus alba clone 717-1B4 control roots, as well as from roots of LINE1 and LINE2 MiSSP7 overexpressor poplars (3 biological replicates each). All samples were labeled with Cy3.
 
Contributor(s) Plett JM, Kohler A, Martin F
Citation(s) 24847068
Submission date Apr 17, 2014
Last update date Jun 02, 2014
Contact name Annegret Kohler
E-mail(s) annegret.kohler@inra.fr
Phone +33 (0)383 394072
Organization name INRA
Department UMR 1136
Lab Interactions Arbres/Micro-organismes
Street address Centre INRA de Nancy
City Champenoux
ZIP/Postal code 54280
Country France
 
Platforms (1)
GPL13485 Populus trichocarpa 12-plex whole genome expression array
Samples (9)
GSM1370386 Populus tremulaxPopulus alba clone 717-1B4 control root 1
GSM1370387 Populus tremulaxPopulus alba clone 717-1B4 control root 2
GSM1370388 Populus tremulaxPopulus alba clone 717-1B4 control root 3
This SubSeries is part of SuperSeries:
GSE56865 Effect of Laccaria bicolor, MiSSP7 from L.bicolor and Jasmonic acid on the Poplar transcriptome
Relations
BioProject PRJNA244821

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE56863_RAW.tar 34.4 Mb (http)(custom) TAR (of PAIR, TXT)
Raw data provided as supplementary file
Processed data included within Sample table
Processed data provided as supplementary file

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