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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Dec 09, 2015 |
| Title |
Expression data from dexamethasone treated mouse embryonic hypothalamic progenitor/stem cells isolated from wild type C57Bl/6 male or female mice |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
We used RNA-Seq to detail the global program of sexually dimorphic dexamethasone regulated gene expression in embryonic hypothalamic neural progenitor/stem cells.
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| Overall design |
RNAseq on Primary E14.5 mouse hyothalamic neurosphere cultures. 4 conditions - Male Dex, Male EtOH, Female Dex and Female EtOH. There are 3 biological replicates for each condition and all the 12 samples are run on two lanes (techinical duplicates).
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| Contributor(s) |
DeFranco DB |
| Citation(s) |
26606517 |
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| Submission date |
Dec 02, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Uma Chandran |
| E-mail(s) |
chandran@pitt.edu
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| Phone |
412-648-9326
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| Organization name |
University of Pittsburgh
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| Department |
BioMedical Informatics
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| Street address |
5150 Center Ave
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| City |
Pittsburgh |
| State/province |
PA |
| ZIP/Postal code |
15232 |
| Country |
USA |
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| Platforms (1) |
| GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
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| Samples (12)
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| GSM1622370 |
Male dexamethasone treatment, biological replicate 1 |
| GSM1622371 |
Male vehicle treatement, biological replicate 1 |
| GSM1622372 |
Female dexamethasone treatment, biological replicate 2 |
| GSM1622373 |
Female vehicle treatement, biological replicate 2 |
| GSM1622374 |
Female dexamethasone treatment, biological replicate 3 |
| GSM1622375 |
Female vehicle treatement, biological replicate 3 |
| GSM1622376 |
Female dexamethasone treatment, biological replicate 1 |
| GSM1622377 |
Female vehicle treatement, biological replicate 1 |
| GSM1622378 |
Male dexamethasone treatment, biological replicate 2 |
| GSM1622379 |
Male vehicle treatement, biological replicate 2 |
| GSM1622380 |
Male dexamethasone treatment, biological replicate 3 |
| GSM1622381 |
Male vehicle treatement, biological replicate 3 |
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| Relations |
| BioProject |
PRJNA304926 |
| SRA |
SRP067022 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE55113_fpkm.cuffdiff.allgenes.txt.gz |
1.9 Mb |
(ftp)(http) |
TXT |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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