|
| Status |
Public on Jan 28, 2014 |
| Title |
SOX9: a Stem Cell Transcriptional Regulator of Secreted Niche Signaling Factors |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
|
| Summary |
Mouse hair follicles undergo synchronized cycles. Cyclical regeneration and hair growth is fueled by hair follicle stem cells (HFSCs). We used RNA-seq to identify SOX9-dependent transcriptional changes and ChIP-seq to identify SOX9-bound genes in HF-SCs.
|
| |
|
| Overall design |
Telogen quiescent hair follicle stem cells (HFSCs) and intefollicular epidermal cells (IFE) were FACS-purified for ChIP-sequcencing and HFSCs for RNA-Sequencing
|
| |
|
| Contributor(s) |
Kadaja M, Fuchs E |
| Citation(s) |
24532713 |
| |
| Submission date |
Jan 27, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
mingyan lin |
| E-mail(s) |
mingyan.lin@phd.einstein.yu.edu
|
| Organization name |
aecom
|
| Street address |
1925 morris park ave
|
| City |
ny |
| ZIP/Postal code |
10461 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
|
| Samples (10)
|
|
| Relations |
| BioProject |
PRJNA236480 |
| SRA |
SRP035885 |
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