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Series GSE544 Query DataSets for GSE544
Status Public on Jul 22, 2003
Title SAM PMN Parturition
Organism Bos taurus
Experiment type Expression profiling by array
Summary Bovine blood neutrophil RNA from 4 primiparous Holstein cows was collected on days -7, 0, 0.25, and 1 (relative to parturition on day 0). RNA was pooled across the four animals at the independent time points to obtain the 20 ug necessary for use in a loop design. RNA pools were separated into two 10 ug aliquots prior to cDNA synthesis and dye coupling in a loop design. Each sample was labeled with Cy3 and Cy5 and run in paired hybridizations as follows: GSM8506 compaired day 0.25 and day -7, GSM8507 compaired day 1 and day 0, GSM8508 compaired day -7 and day 1, GSM8509 compaired day 0 and 0.25. This pairing strategy was utilized to directly compare day -7 samples with days 0.25 and 1 samples because results from previous experiments suggested that the most pronounced differences in gene expression would occur between these days.
Keywords = microarray, cDNA, bovine, neutrophil, parturition
Keywords: time-course
 
 
Contributor(s) Madsen SA, Chang L, Hickey M, Rosa G, Coussens PM, Burton JL
Citation(s) 14583595
Submission date Jul 18, 2003
Last update date Feb 23, 2012
Contact name Sally A Madsen
E-mail(s) madsens1@msu.edu
Phone 517-353-9815
Organization name Michigan State University
Department Animal Science
Lab Immunogenetics Laboratory
Street address B212 Anthony Hall
City East Lansing
State/province MI
ZIP/Postal code 48824
Country USA
 
Platforms (1)
GPL363 BOTL3 7_18_03
Samples (4)
GSM8506 SAMPMNParturition1
GSM8507 SAMPMNParturition2
GSM8508 SAMPMNParturition3
Relations
BioProject PRJNA85295

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