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Series GSE54011 Query DataSets for GSE54011
Status Public on Jul 03, 2014
Title C. Elegans expression: toxic vs. adequate vs. low selenium
Organism Caenorhabditis elegans
Experiment type Expression profiling by array
Summary Genome-wide expression analysis in C. Elegans grown in axenic media with low to toxic selenium concentrations
We performed Affymetrix micorarray-based transcriptional profiling on wild-type C. Elegans Bristol N2 grown in low Se axenic media supplemented with five concentrations of selenium, from low to toxic, and harvested at the L4-larva stage.
Overall design RNA was prepared for hybridization to Affy microarrays from synchronized cultures of wild-type C. elegans seeded in low Se axenic media, supplemented with graded 0, 0.05, 0.1, 0.2, and 0.4 mM Se added as sodium selenite, and harvested at the L4-larva stage (1 culture/sample per Se concentgration).
Contributor(s) Sunde RA
Citation(s) 24971995
Submission date Jan 13, 2014
Last update date Jul 06, 2016
Contact name Roger A Sunde
Phone 608-262-4044
Organization name University of Wisconsin
Department Nutritional Sciences
Street address 1415 Linden Dr
City Madison
State/province WI
ZIP/Postal code 53706-1527
Country USA
Platforms (1)
GPL200 [Celegans] Affymetrix C. elegans Genome Array
Samples (5)
GSM1305849 Ce 0 mM Se
GSM1305850 Ce 0.05 mM Se
GSM1305851 Ce 0.1 mM Se
BioProject PRJNA234349

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE54011_RAW.tar 9.8 Mb (http)(custom) TAR (of CEL)
GSE54011_normalized_data_annot.txt.gz 410.3 Kb (ftp)(http) TXT
Raw data provided as supplementary file
Processed data included within Sample table

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