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GEO accession:
Series GSE53585
Query DataSets for GSE53585
Status
Public on Dec 24, 2013
Title
Multiple Overlapping Mammalian Chromatin Remodeling Systems Collaborate Genome-wide at Dynamic Chromatin Transitions
Organism
Mus musculus
Experiment type
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by array
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
24317492
Submission date
Dec 23, 2013
Last update date
May 15, 2019
Contact name
Songjoon Baek
Organization name
NCI / NIH
Department
CCR
Lab
LRBGE
Street address
41 Library Drive
City
Bethesda
State/province
MD
ZIP/Postal code
20892
Country
USA
Platforms (2)
GPL6246
[MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]
GPL9185
Illumina Genome Analyzer (Mus musculus)
Samples (33)
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More...
GSM1296401
monoclonal Brg1 ChIP-Seq 1
GSM1296402
monoclonal Brg1 ChIP-Seq 2
GSM1296403
CHD4 ChIP-Seq 1
GSM1296404
CHD4 ChIP-Seq 2
GSM1296405
Snf2h ChIP-Seq 1
GSM1296406
Snf2h ChIP-Seq 2
GSM1296407
DNA input 1
GSM1296408
DNA input 2
GSM1296409
DNase-Seq (+tet) 1
GSM1296410
DNase-Seq (-tet) 2
GSM1296411
DNase-Seq (DNBrg1) 1
GSM1296412
DNase-Seq (DNBrg1) 2
GSM1296413
DNase-Seq (DNCHD4) 1
GSM1296414
DNase-Seq (DNCHD4) 2
GSM1296415
DNase-Seq (DNSnf2h) 1
GSM1296416
DNase-Seq (DNSnf2h) 2
GSM1624708
3134Tet_-TetActivator_48hrs_rep1
GSM1624709
3134Tet_-TetActivator_48hrs_rep2
GSM1624710
3134Tet_+TetActivator_48hrs_rep1
GSM1624711
3134Tet_+TetActivator_48hrs_rep2
GSM1624712
3134Tet_+TetActivator_48hrs_rep3
GSM1624713
3134Tet_-dnBrg1_48hrs_rep1
GSM1624714
3134Tet_-dnBrg1_48hrs_rep2
GSM1624715
3134Tet_+dnBrg1_48hrs_rep1
GSM1624716
3134Tet_+dnBrg1_48hrs_rep2
GSM1624717
3134Tet_-dnChd4_48hrs_rep1
GSM1624718
3134Tet_-dnChd4_48hrs_rep2
GSM1624719
3134Tet_+dnChd4_48hrs_rep1
GSM1624720
3134Tet_+dnChd4_48hrs_rep2
GSM1624721
3134Tet_-dnSnf2h_48hrs_rep1
GSM1624722
3134Tet_-dnSnf2h_48hrs_rep2
GSM1624723
3134Tet_+dnSnf2h_48hrs_rep1
GSM1624724
3134Tet_+dnSnf2h_48hrs_rep2
This SuperSeries is composed of the following SubSeries:
GSE53583
Multiple Overlapping Mammalian Chromatin Remodeling Systems Collaborate Genome-wide at Dynamic Chromatin Transitions (ChIP-Seq)
GSE53584
Multiple Overlapping Mammalian Chromatin Remodeling Systems Collaborate Genome-wide at Dynamic Chromatin Transitions (Dnase-Seq)
GSE66544
Multiple Overlapping Mammalian Chromatin Remodeling Systems Collaborate Genome-wide at Dynamic Chromatin Transitions [Affymetrix]
Relations
BioProject
PRJNA232455
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE53585_RAW.tar
845.3 Mb
(http)
(custom)
TAR (of BEDGRAPH, CEL, CHP, CSV)
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