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Series GSE53395 Query DataSets for GSE53395
Status Public on Dec 18, 2013
Title Expression of mutant p53 in Mammary carcinomas in WAP-SV40 transgenic mice
Organism Mus musculus
Experiment type Expression profiling by array
Summary Upon induction, WAP-T mice express two synergistically acting SV40 early region encoded proteins, large (LT) and small (sT) tumor antigens in the mammary epithelium, recapitulating thereby the loss of p53 and Rb function and deregulation of PP2A-controlled mitogenic pathways in human breast cancer. In primiparous mice, WAP-promoter driven expression of SV40 proteins induces well and poorly differentiated (respectively low- and high-grade) mammary adenocarcinomas.
We here studied the postulated mutant p53 (mutp53) 'gain of function' during mammary tumor development, progression and metastasis by crossing WAP-T mice with mutant p53 transgenic WAP-mutp53 mice.
 
Overall design This study includes gene expression analysis of 12 high grade mammary carcinoma samples. An alternative probe set mapping published by the AffyProbeMiner project (remapped transcript consistent cdf-file) was used to calculate probe set signals of 6 mono-trangenic WAP-T-NP8 samples from the dataset GSE29117 and 6 bi-transgenic WAP-T-NP8 x WAP-W10 (mutp53R245R) samples.
 
Contributor(s) Deppert W, Tolstonog G, Wegwitz F
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Submission date Dec 17, 2013
Last update date Dec 19, 2013
Contact name Florian Wegwitz
Organization name University Medical Center Hamburg-Eppendorf
Department Department of Tumor Biology
Lab Group Prof. Dr. Wolfgang Deppert
Street address Martinistraße 52
City Hamburg
State/province Hamburg
ZIP/Postal code 20246
Country Germany
 
Platforms (1)
GPL18078 Affymetrix GeneChip Mouse Genome 430 2.0 Array [AffyProbeMiner cdf (Mouse430_2_transcript_refseq) version 1.0.0]
Samples (12)
GSM1290799 G3-NP8_11304-3
GSM1290800 G3-NP8_12108-5
GSM1290801 G3-NP8_12109-1
Relations
BioProject PRJNA231914

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE53395_RAW.tar 56.1 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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