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Series GSE53000 Query DataSets for GSE53000
Status Public on Jan 06, 2014
Title Expression data from spatially separated samples of different ccRCC patients
Organism Homo sapiens
Experiment type Expression profiling by array
Summary We have sampled several tumour regions from nine clear cell renal cell carcinoma (ccRCC) patients to investigate intra-tumour heterogeneity.
 
Overall design We selected 56 tumour samples and 6 normal samples from the 9 patients for expression analysis using microarray data. All samples were fresh frozen upon extraction.
 
Contributor(s) Rowan A, Swanton C
Citation(s) 24487277
Submission date Dec 04, 2013
Last update date Jul 26, 2018
Contact name Pierre Martinez
Organization name Cancer Research Centre of Lyon
Lab EMT and Cancer Cell Plasticity
Street address 28 rue Laennec
City Lyon cedex 08
ZIP/Postal code 69373
Country France
 
Platforms (1)
GPL6244 [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version]
Samples (62)
GSM1279951 Normal kidney, EV002-N
GSM1279952 Normal kidney, EV003-N
GSM1279953 Normal kidney, EV005-N
Relations
BioProject PRJNA230646

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE53000_RAW.tar 259.8 Mb (http)(custom) TAR (of CEL)
Raw data provided as supplementary file
Processed data included within Sample table

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