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Series GSE52814 Query DataSets for GSE52814
Status Public on Jul 08, 2014
Title Natural epigenetic polymorphisms lead to intraspecific variation in Arabidopsis gene imprinting
Organism Arabidopsis thaliana
Experiment type Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 24994762
Submission date Nov 27, 2013
Last update date May 15, 2019
Contact name Mary Gehring
Organization name Whitehead Institute for Biomedical Research
Street address 9 Cambridge Center
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Platforms (1)
GPL13222 Illumina HiSeq 2000 (Arabidopsis thaliana)
Samples (56)
GSM1276483 BS-Seq Col embryo
GSM1276484 BS-Seq Col endosperm
GSM1276485 BS-Seq Ler embryo
This SuperSeries is composed of the following SubSeries:
GSE52805 Natural epigenetic polymorphisms lead to intraspecific variation in Arabidopsis gene imprinting: BS-seq of Arabidopsis thaliana Col, Ler, and Cvi parental and reciprocal F1 hybrid embryo and endosperm
GSE52806 Natural epigenetic polymorphisms lead to intraspecific variation in Arabidopsis gene imprinting: allele specific mRNA-seq expression profiling in Arabidopsis thaliana Col, Ler, and Cvi parental and reciprocal F1 hybrid embryo and endosperm
GSE52807 Natural epigenetic polymorphisms lead to intraspecific variation in Arabidopsis gene imprinting: small RNA-seq profiling in Arabidopsis thaliana Col, Ler, and Cvi parental and reciprocal F1 hybrid seeds
Relations
BioProject PRJNA230120

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE52814_RAW.tar 301.4 Mb (http)(custom) TAR (of BED, TXT)

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