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Series GSE52580 Query DataSets for GSE52580
Status Public on Dec 15, 2013
Title An Immunosignature system for diagnosis of cancer [Cancer immunosignaturing - test 1]
Platform organism synthetic construct
Sample organism Homo sapiens
Experiment type Protein profiling by protein array
Summary This dataset contains peptide array information from 120 patients from 5 different cancer types using classic blinded test/train method. This array is library 1 (GPL17600).
 
Overall design A 1:500 dilution of human serum is added to a peptide array (GPL17600). This array is a two-up design, with 10420 peptides printed on the top and bottom of a standard glass microscope slide. Samples were run in duplicate. The average of the duplicates are listed here. 20 train and 20 blinded test samples were run.
 
Contributor(s) Stafford P, Zbigniew C, Johnston S
Citation(s) 25024171
Submission date Nov 20, 2013
Last update date Aug 01, 2014
Contact name Phillip Stafford
E-mail(s) phillip.stafford@asu.edu
Organization name Biodesign Institute
Department Center for Innovations in Medicine
Lab Biostatistics
Street address 1001 S. McAllister
City Phoenix
State/province AZ
ZIP/Postal code 85287
Country USA
 
Platforms (1)
GPL17600 10K immunosignaturing peptide microarray version 2
Samples (240)
GSM1270066 Brain cancer - test1
GSM1270067 Brain cancer - test2
GSM1270068 Brain cancer - test3
This SubSeries is part of SuperSeries:
GSE52582 An Immunosignature system for diagnosis of cancer
Relations
BioProject PRJNA229412

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE52580_test1_normalized_matrix.txt.gz 10.4 Mb (ftp)(http) TXT
GSE52580_test1_raw_matrix.txt.gz 13.0 Mb (ftp)(http) TXT
Processed data are available on Series record

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