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Series GSE51939 Query DataSets for GSE51939
Status Public on Mar 01, 2014
Title Clustering of CpG islands constitutes an important determinant of the interphase chromosome 3D organization
Organism Gallus gallus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 24736527
Submission date Oct 31, 2013
Last update date May 15, 2019
Contact name Artem V Artemov
Organization name Medical University of Vienna
Department Center for Brain Research
Street address Spitalgasse 4
City Vienna
ZIP/Postal code 1090
Country Austria
 
Platforms (1)
GPL16133 Illumina HiSeq 2000 (Gallus gallus)
Samples (10)
GSM1253764 HD3 input control [ChIP-Seq]
GSM1253765 CTCF HD3 non-induced [ChIP-Seq]
GSM1253766 CTCF HD3 induced [ChIP-Seq]
This SuperSeries is composed of the following SubSeries:
GSE51846 Clustering of CpG islands constitutes an important determinant of the interphase chromosome 3D organization [ChIP-Seq]
GSE51937 Clustering of CpG islands constitutes an important determinant of the interphase chromosome 3D organization [4C-Seq]
Relations
BioProject PRJNA225861

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE51939_RAW.tar 28.2 Mb (http)(custom) TAR (of BED, BEDGRAPH)
SRA Run SelectorHelp

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